Lukas M Weber[Author] - Search Results

Year	Number of Results
2014	1
2016	4
2017	1
2018	2
2019	3
2020	1
2021	6
2022	3
2023	3
2024	1

1

Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex.

Maynard KR, Collado-Torres L, Weber LM, Uytingco C, Barry BK, Williams SR, Catallini JL 2nd, Tran MN, Besich Z, Tippani M, Chew J, Yin Y, Kleinman JE, Hyde TM, Rao N, Hicks SC, Martinowich K, Jaffe AE. Maynard KR, et al. Among authors: weber lm. Nat Neurosci. 2021 Mar;24(3):425-436. doi: 10.1038/s41593-020-00787-0. Epub 2021 Feb 8. Nat Neurosci. 2021. PMID: 33558695 Free PMC article.

2

High-dimensional single-cell analysis predicts response to anti-PD-1 immunotherapy.

Krieg C, Nowicka M, Guglietta S, Schindler S, Hartmann FJ, Weber LM, Dummer R, Robinson MD, Levesque MP, Becher B. Krieg C, et al. Among authors: weber lm. Nat Med. 2018 Feb;24(2):144-153. doi: 10.1038/nm.4466. Epub 2018 Jan 8. Nat Med. 2018. PMID: 29309059 Free article.

3

Essential guidelines for computational method benchmarking.

Weber LM, Saelens W, Cannoodt R, Soneson C, Hapfelmeier A, Gardner PP, Boulesteix AL, Saeys Y, Robinson MD. Weber LM, et al. Genome Biol. 2019 Jun 20;20(1):125. doi: 10.1186/s13059-019-1738-8. Genome Biol. 2019. PMID: 31221194 Free PMC article. Review.

4

Statistical methods for detecting differentially methylated loci and regions.

Robinson MD, Kahraman A, Law CW, Lindsay H, Nowicka M, Weber LM, Zhou X. Robinson MD, et al. Among authors: weber lm. Front Genet. 2014 Sep 16;5:324. doi: 10.3389/fgene.2014.00324. eCollection 2014. Front Genet. 2014. PMID: 25278959 Free PMC article. Review.

5

SpatialExperiment: infrastructure for spatially-resolved transcriptomics data in R using Bioconductor.

Righelli D, Weber LM, Crowell HL, Pardo B, Collado-Torres L, Ghazanfar S, Lun ATL, Hicks SC, Risso D. Righelli D, et al. Among authors: weber lm. Bioinformatics. 2022 May 26;38(11):3128-3131. doi: 10.1093/bioinformatics/btac299. Bioinformatics. 2022. PMID: 35482478 Free PMC article.

6

spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data.

Pardo B, Spangler A, Weber LM, Page SC, Hicks SC, Jaffe AE, Martinowich K, Maynard KR, Collado-Torres L. Pardo B, et al. Among authors: weber lm. BMC Genomics. 2022 Jun 10;23(1):434. doi: 10.1186/s12864-022-08601-w. BMC Genomics. 2022. PMID: 35689177 Free PMC article.

7

An updated guide for the perplexed: cytometry in the high-dimensional era.

Liechti T, Weber LM, Ashhurst TM, Stanley N, Prlic M, Van Gassen S, Mair F. Liechti T, et al. Among authors: weber lm. Nat Immunol. 2021 Oct;22(10):1190-1197. doi: 10.1038/s41590-021-01006-z. Nat Immunol. 2021. PMID: 34489590 No abstract available.

8

nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes.

Weber LM, Saha A, Datta A, Hansen KD, Hicks SC. Weber LM, et al. Nat Commun. 2023 Jul 10;14(1):4059. doi: 10.1038/s41467-023-39748-z. Nat Commun. 2023. PMID: 37429865 Free PMC article.

9

diffcyt: Differential discovery in high-dimensional cytometry via high-resolution clustering.

Weber LM, Nowicka M, Soneson C, Robinson MD. Weber LM, et al. Commun Biol. 2019 May 14;2:183. doi: 10.1038/s42003-019-0415-5. eCollection 2019. Commun Biol. 2019. PMID: 31098416 Free PMC article.

10

Maximizing mutagenesis with solubilized CRISPR-Cas9 ribonucleoprotein complexes.

Burger A, Lindsay H, Felker A, Hess C, Anders C, Chiavacci E, Zaugg J, Weber LM, Catena R, Jinek M, Robinson MD, Mosimann C. Burger A, et al. Among authors: weber lm. Development. 2016 Jun 1;143(11):2025-37. doi: 10.1242/dev.134809. Epub 2016 Apr 29. Development. 2016. PMID: 27130213 Free article.

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